Disease: Autoimmune Diseases
Source: ALL
Variant Gene DSI v DPI v Chr Position Consequence Alleles Class AF EXOME AF GENOME Num. diseases
rs2476601
AP4B1-AS1 ; PTPN22
0.498 0.800 1 113834946 missense variant A/G snv 0.93 0.93 121
rs1036199
HAVCR2
0.925 0.160 5 157104725 missense variant C/A snv 0.87 0.83 3
rs1883832
CD40
0.581 0.680 20 46118343 5 prime UTR variant T/C snv 0.75 0.80 52
rs1059702
IRAK1
0.807 0.280 X 154018741 missense variant A/G snv 0.72 7
rs2910164
MIR3142HG ; MIR146A
0.447 0.880 5 160485411 mature miRNA variant C/G snv 0.71; 4.1E-06 0.70 193
rs3811047
IL37
0.807 0.400 2 112913833 missense variant A/G snv 0.71 0.60 10
rs25487
XRCC1
0.441 0.800 19 43551574 missense variant T/C snv 0.68 0.71 205
rs1059703
IRAK1
0.851 0.280 X 154013378 missense variant G/A snv 0.67 6
rs1126407
LOC107985367 ; LGALS8
0.925 0.200 1 236537507 missense variant T/A snv 0.61 0.61 3
rs237025
SUMO4 ; TAB2
0.672 0.360 6 149400554 missense variant G/A snv 0.55 0.57 26
rs763361
CD226
0.689 0.520 18 69864406 missense variant T/A;C snv 4.0E-06; 0.52 21
rs1990760
IFIH1
0.672 0.480 2 162267541 missense variant C/T snv 0.50 0.45 33
rs1801274
FCGR2A
0.597 0.800 1 161509955 missense variant A/C;G snv 4.0E-06; 0.48 46
rs2229080
DCC
0.742 0.320 18 52906232 missense variant C/A;G snv 0.45 16
rs945635
FCRL3
0.882 0.200 1 157700500 5 prime UTR variant C/A;G snv 5.6E-05; 0.45 4
rs5498
ICAM4 ; ICAM1
0.531 0.760 19 10285007 missense variant A/G snv 0.44 0.37 99
rs2076530
TSBP1-AS1 ; BTNL2
0.724 0.640 6 32396039 missense variant T/C snv 0.42 0.40 17
rs231775
CTLA4
0.504 0.720 2 203867991 missense variant A/G;T snv 0.42; 4.0E-06 115
rs767455
TNFRSF1A
0.742 0.400 12 6341779 synonymous variant T/C snv 0.37 0.40 13
rs396991
FCGR3A
0.742 0.480 1 161544752 missense variant A/C;G;T snv 0.33; 4.1E-06 14
rs3733197
BANK1
0.742 0.320 4 101918130 missense variant G/A snv 0.31 0.30 13
rs17561
IL1A
0.672 0.560 2 112779646 missense variant C/A snv 0.27 0.26 23
rs10516487
BANK1
0.752 0.360 4 101829919 missense variant G/A;T snv 0.26; 8.0E-06 11
rs17266594
BANK1
0.807 0.280 4 101829765 intron variant T/C snv 0.25 0.27 7
rs3731865
SLC11A1
0.882 0.160 2 218385280 non coding transcript exon variant G/A;C;T snv 0.23; 1.4E-04 5